Minnesota Online High School has been honored with
- 2017 Minnesota Association of Charter Schools Innovation Award in New Forms of Accountability for Schools
- Minnesota Excellence in Collaboration Award from the 2016 Minnesota eLearning Summit
- 2016 and 2014 Synergy and Leadership Exchange Promising Practices Award
- MDE School Finance Award, FY 2006-2016
- 2014 CommonSense Media Certified School
- 2014 Starfish 360 Awards Honorable Mention
- 2013: National Accreditation from NCA/AdvancED with four strong commendations
- 2008: EDS Technology Award for introducing Fathom Dynamic Data Software into the MNOHS math and science curriculum
