Minnesota Online High School has been honored with:
- 2019 Novo Foundation SEL Grant to support our Peer Leaders program
- 2018 AdvancED Re-accreditation
- 2017 Bush Foundation school redesign planning grant
- 2017 Minnesota Association of Charter Schools Innovation Award in New Forms of Accountability for Schools
- MDE School Finance Award, FY 2006-2018
- Minnesota Excellence in Collaboration Award from the 2016 Minnesota eLearning Summit
- 2016 Minnesota Department of Education Support Our Students grant
- 2016 and 2014 Synergy and Leadership Exchange Promising Practices Award
- 2014 CommonSense Media Certified School
- 2014 Starfish 360 Awards Honorable Mention
- 2013: National Accreditation from NCA/AdvancED with four strong commendations
- 2008: EDS Technology Award for introducing Fathom Dynamic Data Software into the MNOHS math and science curriculum
